To microwave or not to microwave water for tea—that is the question. Opinions on this topic are easy to find, but clear, evidence-based conclusions are harder to come by.

Consumer Reports’ microwave oven buying guide (last updated May 2012)
There is no clear consensus on the issue. Informal discussions—particularly on online forums—often show a slight bias against microwaving, with critics claiming that it results in a flatter or less satisfying flavor.
For examples of these discussions, see
this forum discussion debating microwave versus kettle heating methods for tea
and
this conversation among tea enthusiasts on the pros and cons of microwaving water
,
both of which showcase a range of opinions.

Plato’s Allegory of the Cave illustration
Having used stovetop kettles, electric kettles, and automatic tea makers, I eventually switched to the microwave for convenience and have had no major complaints.
Of course, it’s possible that—like the figures in
Plato’s Allegory of the Cave, a philosophical concept about limited perception
—
I’m simply unaware of what I might be missing without a direct comparison.
One blogger attempted a small-scale comparison by organizing a taste test using microwaved versus kettle-heated water. Although the test was informal,
this write-up of a tea taste test experiment comparing microwave and kettle methods
reported that microwaved water performed slightly better in blind tasting.

Tea kettle options for heating water
However, controlled scientific studies comparing these methods appear to be lacking. Until such research emerges, the most practical approach is likely to choose whichever method best suits your preferences and routine.
For those interested in the environmental aspects of heating water, see
this discussion comparing the energy efficiency of different water-heating methods
and
this analysis of microwave versus stovetop energy use for heating liquids
,
which present differing viewpoints.
Safety is another consideration. According to
this explanation debunking myths about superheated water in microwave ovens
,
the phenomenon of superheating is real but relatively uncommon. Simple precautions—such as placing a non-metallic object in the water while heating—can reduce the risk.
See also:
this overview of tea kettle options and their features
this discussion of kettle materials and performance
this exploration of boiling behavior and common tea-related sayings
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